pCDNA3.1-EGFP
PVT10754 2ug
pCDNA3.1-EGFP Information
Promoter: CMV promoter
Replicon: pUC ori, F1 ori
Terminator: BGH poly (A) signal
Plasmid classification: lactation serial plasmid; lactation expression plasmid; pCDNA series plasmid.
Plasmid size: 6173bp
Plasmid tagging: C-EGFP
Prokaryotic resistance: ampicillin Amp (100 ng/ml)
Screening marker: neomycin Neo/G418
Cloning strains: E. coli DH5 and E.
Culture conditions: 37 C, aerobic, LB
Expression host: mammalian cells such as 293T
Induction mode: no need to induce
5'sequencing primers: pCDNA3.1-F (CTAGAGAACCCACTGCTTAC)
3'sequencing primers: pCDNA3.1-R (TAGAAGGCACAGTCGAGG)
Note: Restriction site is different from PVT10755 pCDNA3.1-EGFP-2
pCDNA3.1-EGFP Description
pCDNA3.1-EGFP is a Mammalian fluorescent plasmid.
pCDNA3.1-EGFP was obtained by cloning the EGFP gene into the pCDNA3.1 vector. It was designed for stable and transient expression in mammalian hosts. Most mammalian cells can perform high levels of stable and non replicating transient expression. Human cytomegalovirus immediate early (CMV) promoter is used for high level expression in a wide range of mammalian cells. Abnormal replication in cell lines with latent infection of SV40 or expression of SV40 large T antigen (e.g. COS-1, COS-7).
The GFP in pcDNA3.1-eGFP stands for green fluorescent protein. Deoxyribonucleic acids (DNAs) are typically made up of protein, so it makes sense for a special protein to make up a specific type of DNA add-gene such as the pcDNA3.1.although other means besides cloning would also be openly discussed. In this study, a detailed overview of how pcDNA-eGFP can be produced through cloning is done thanks to the use of secondary sources; a proper review of the pcDNA3.1-eGFP is first carried out to understand this compound. Afterward, the importance of a vector in the cloning process is looked at in detail and finally the cloning system is covered extensivel GFP proteins are generally composed of 238 amino acids with molecular masses of around 26.9 KD [1] and are typically used in the field of molecular biology as one of the many reporter genes. Basically, a reporter gene is a type of gene that researchers, especially in laboratory experiments, use to attach to a pre-specified sequence of the gene (oftentimes an experimental one) such as that of bacteria, plants, animals, and cell cultures. Some of the criteria that researchers use when selecting a reporter gene include, but may not be limited to, having easily identifiable and selectable markers and their ability to introduce changes that tend to be easily spotted under certain conditions. When conducting laboratory experiments in molecular biology, it would be important for researchers to know the different variables involved and the impact that they create on the experimental environment. Therefore, it makes sense to select reporter genes that possess these qualities such as the GFP [1]. In previously published studies involving the use of GFPs, including but not limited to pcDNA3.1, it has been common for researchers to introduce the GFP gene into cells using vector-based systems. In some cases, the researchers also used recombinant viruses (attaching the GFP to them). Being used as a reporter protein, the location of the target protein can be easily identified and expressed. However, in many of the laboratory experiments, the selection market of the GFPs used was not specific enough and there is often no selection market to normalize the transfection among other reactions.
pCDNA3.1-EGFP Multiple cloning site
pCDNA3.1-EGFP Sequence
LOCUS Exported 6173 bp ds-DNA circular SYN 07-12-2015
DEFINITION synthetic circular DNA
KEYWORDS pCDNA3.1(+)-EGFP
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6173)
TITLE Direct Submission
JOURNAL Exported 2016-9-18
FEATURES Location/Qualifiers
source 1..6173
/organism="synthetic DNA construct"
/mol_type="other DNA"
enhancer 236..615
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 616..819
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
promoter 864..882
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 1003..1722
/codon_start=1
/product="enhanced GFP"
/note="EGFP"
/note="mammalian codon-optimized"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
polyA_signal 1774..1998
/note="bGH poly(A) signal"
/note="bovine growth hormone polyadenylation signal"
rep_origin 2044..2472
/direction=RIGHT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2486..2815
/note="SV40 promoter"
/note="SV40 enhancer and early promoter"
rep_origin 2666..2801
/note="SV40 ori"
/note="SV40 origin of replication"
CDS 2882..3676
/codon_start=1
/gene="aph(3')-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/note="NeoR/KanR"
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
polyA_signal 3850..3971
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
primer_bind complement(4020..4036)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4044..4060
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4068..4098)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 4113..4134
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4422..5007)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5178..6038)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6039..6143)
/gene="bla"
/note="AmpR promoter"
ORIGIN
1 cgacggatcg ggagatctcc cgatccccta tggtgcactc tcagtacaat ctgctctgat
61 gccgcatagt taagccagta tctgctccct gcttgtgtgt tggaggtcgc tgagtagtgc
121 gcgagcaaaa tttaagctac aacaaggcaa ggcttgaccg acaattgcat gaagaatctg
181 cttagggtta ggcgttttgc gctgcttcgc gatgtacggg ccagatatac gcgttgacat
241 tgattattga ctagttatta atagtaatca attacggggt cattagttca tagcccatat
301 atggagttcc gcgttacata acttacggta aatggcccgc ctggctgacc gcccaacgac
361 ccccgcccat tgacgtcaat aatgacgtat gttcccatag taacgccaat agggactttc
421 cattgacgtc aatgggtgga gtatttacgg taaactgccc acttggcagt acatcaagtg
481 tatcatatgc caagtacgcc ccctattgac gtcaatgacg gtaaatggcc cgcctggcat
541 tatgcccagt acatgacctt atgggacttt cctacttggc agtacatcta cgtattagtc
601 atcgctatta ccatggtgat gcggttttgg cagtacatca atgggcgtgg atagcggttt
661 gactcacggg gatttccaag tctccacccc attgacgtca atgggagttt gttttggcac
721 caaaatcaac gggactttcc aaaatgtcgt aacaactccg ccccattgac gcaaatgggc
781 ggtaggcgtg tacggtggga ggtctatata agcagagctc tctggctaac tagagaaccc
841 actgcttact ggcttatcga aattaatacg actcactata gggagaccca agctggctag
901 cgtttaaact taagcttggt accgagctcg gatccactag tccagtgtgg tggaattctg
961 cagtcgacgg taccgcgggc ccgggatcca ccggtcgcca ccatggtgag caagggcgag
1021 gagctgttca ccggggtggt gcccatcctg gtcgagctgg acggcgacgt aaacggccac
1081 aagttcagcg tgtccggcga gggcgagggc gatgccacct acggcaagct gaccctgaag
1141 ttcatctgca ccaccggcaa gctgcccgtg ccctggccca ccctcgtgac caccctgacc
1201 tacggcgtgc agtgcttcag ccgctacccc gaccacatga agcagcacga cttcttcaag
1261 tccgccatgc ccgaaggcta cgtccaggag cgcaccatct tcttcaagga cgacggcaac
1321 tacaagaccc gcgccgaggt gaagttcgag ggcgacaccc tggtgaaccg catcgagctg
1381 aagggcatcg acttcaagga ggacggcaac atcctggggc acaagctgga gtacaactac
1441 aacagccaca acgtctatat catggccgac aagcagaaga acggcatcaa ggtgaacttc
1501 aagatccgcc acaacatcga ggacggcagc gtgcagctcg ccgaccacta ccagcagaac
1561 acccccatcg gcgacggccc cgtgctgctg cccgacaacc actacctgag cacccagtcc
1621 gccctgagca aagaccccaa cgagaagcgc gatcacatgg tcctgctgga gttcgtgacc
1681 gccgccggga tcactctcgg catggacgag ctgtacaagt aaagcggccg ctcgagtcta
1741 gagggcccgt ttaaacccgc tgatcagcct cgactgtgcc ttctagttgc cagccatctg
1801 ttgtttgccc ctcccccgtg ccttccttga ccctggaagg tgccactccc actgtccttt
1861 cctaataaaa tgaggaaatt gcatcgcatt gtctgagtag gtgtcattct attctggggg
1921 gtggggtggg gcaggacagc aagggggagg attgggaaga caatagcagg catgctgggg
1981 atgcggtggg ctctatggct tctgaggcgg aaagaaccag ctggggctct agggggtatc
2041 cccacgcgcc ctgtagcggc gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga
2101 ccgctacact tgccagcgcc ctagcgcccg ctcctttcgc tttcttccct tcctttctcg
2161 ccacgttcgc cggctttccc cgtcaagctc taaatcgggg gctcccttta gggttccgat
2221 ttagtgcttt acggcacctc gaccccaaaa aacttgatta gggtgatggt tcacgtagtg
2281 ggccatcgcc ctgatagacg gtttttcgcc ctttgacgtt ggagtccacg ttctttaata
2341 gtggactctt gttccaaact ggaacaacac tcaaccctat ctcggtctat tcttttgatt
2401 tataagggat tttgccgatt tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat
2461 ttaacgcgaa ttaattctgt ggaatgtgtg tcagttaggg tgtggaaagt ccccaggctc
2521 cccagcaggc agaagtatgc aaagcatgca tctcaattag tcagcaacca ggtgtggaaa
2581 gtccccaggc tccccagcag gcagaagtat gcaaagcatg catctcaatt agtcagcaac
2641 catagtcccg cccctaactc cgcccatccc gcccctaact ccgcccagtt ccgcccattc
2701 tccgccccat ggctgactaa ttttttttat ttatgcagag gccgaggccg cctctgcctc
2761 tgagctattc cagaagtagt gaggaggctt ttttggaggc ctaggctttt gcaaaaagct
2821 cccgggagct tgtatatcca ttttcggatc tgatcaagag acaggatgag gatcgtttcg
2881 catgattgaa caagatggat tgcacgcagg ttctccggcc gcttgggtgg agaggctatt
2941 cggctatgac tgggcacaac agacaatcgg ctgctctgat gccgccgtgt tccggctgtc
3001 agcgcagggg cgcccggttc tttttgtcaa gaccgacctg tccggtgccc tgaatgaact
3061 gcaggacgag gcagcgcggc tatcgtggct ggccacgacg ggcgttcctt gcgcagctgt
3121 gctcgacgtt gtcactgaag cgggaaggga ctggctgcta ttgggcgaag tgccggggca
3181 ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg ctgatgcaat
3241 gcggcggctg catacgcttg atccggctac ctgcccattc gaccaccaag cgaaacatcg
3301 catcgagcga gcacgtactc ggatggaagc cggtcttgtc gatcaggatg atctggacga
3361 agagcatcag gggctcgcgc cagccgaact gttcgccagg ctcaaggcgc gcatgcccga
3421 cggcgaggat ctcgtcgtga cccatggcga tgcctgcttg ccgaatatca tggtggaaaa
3481 tggccgcttt tctggattca tcgactgtgg ccggctgggt gtggcggacc gctatcagga
3541 catagcgttg gctacccgtg atattgctga agagcttggc ggcgaatggg ctgaccgctt
3601 cctcgtgctt tacggtatcg ccgctcccga ttcgcagcgc atcgccttct atcgccttct
3661 tgacgagttc ttctgagcgg gactctgggg ttcgaaatga ccgaccaagc gacgcccaac
3721 ctgccatcac gagatttcga ttccaccgcc gccttctatg aaaggttggg cttcggaatc
3781 gttttccggg acgccggctg gatgatcctc cagcgcgggg atctcatgct ggagttcttc
3841 gcccacccca acttgtttat tgcagcttat aatggttaca aataaagcaa tagcatcaca
3901 aatttcacaa ataaagcatt tttttcactg cattctagtt gtggtttgtc caaactcatc
3961 aatgtatctt atcatgtctg tataccgtcg acctctagct agagcttggc gtaatcatgg
4021 tcatagctgt ttcctgtgtg aaattgttat ccgctcacaa ttccacacaa catacgagcc
4081 ggaagcataa agtgtaaagc ctggggtgcc taatgagtga gctaactcac attaattgcg
4141 ttgcgctcac tgcccgcttt ccagtcggga aacctgtcgt gccagctgca ttaatgaatc
4201 ggccaacgcg cggggagagg cggtttgcgt attgggcgct cttccgcttc ctcgctcact
4261 gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat cagctcactc aaaggcggta
4321 atacggttat ccacagaatc aggggataac gcaggaaaga acatgtgagc aaaaggccag
4381 caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt ttttccatag gctccgcccc
4441 cctgacgagc atcacaaaaa tcgacgctca agtcagaggt ggcgaaaccc gacaggacta
4501 taaagatacc aggcgtttcc ccctggaagc tccctcgtgc gctctcctgt tccgaccctg
4561 ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa gcgtggcgct ttctcatagc
4621 tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct ccaagctggg ctgtgtgcac
4681 gaaccccccg ttcagcccga ccgctgcgcc ttatccggta actatcgtct tgagtccaac
4741 ccggtaagac acgacttatc gccactggca gcagccactg gtaacaggat tagcagagcg
4801 aggtatgtag gcggtgctac agagttcttg aagtggtggc ctaactacgg ctacactaga
4861 agaacagtat ttggtatctg cgctctgctg aagccagtta ccttcggaaa aagagttggt
4921 agctcttgat ccggcaaaca aaccaccgct ggtagcggtt tttttgtttg caagcagcag
4981 attacgcgca gaaaaaaagg atctcaagaa gatcctttga tcttttctac ggggtctgac
5041 gctcagtgga acgaaaactc acgttaaggg attttggtca tgagattatc aaaaaggatc
5101 ttcacctaga tccttttaaa ttaaaaatga agttttaaat caatctaaag tatatatgag
5161 taaacttggt ctgacagtta ccaatgctta atcagtgagg cacctatctc agcgatctgt
5221 ctatttcgtt catccatagt tgcctgactc cccgtcgtgt agataactac gatacgggag
5281 ggcttaccat ctggccccag tgctgcaatg ataccgcgag acccacgctc accggctcca
5341 gatttatcag caataaacca gccagccgga agggccgagc gcagaagtgg tcctgcaact
5401 ttatccgcct ccatccagtc tattaattgt tgccgggaag ctagagtaag tagttcgcca
5461 gttaatagtt tgcgcaacgt tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg
5521 tttggtatgg cttcattcag ctccggttcc caacgatcaa ggcgagttac atgatccccc
5581 atgttgtgca aaaaagcggt tagctccttc ggtcctccga tcgttgtcag aagtaagttg
5641 gccgcagtgt tatcactcat ggttatggca gcactgcata attctcttac tgtcatgcca
5701 tccgtaagat gcttttctgt gactggtgag tactcaacca agtcattctg agaatagtgt
5761 atgcggcgac cgagttgctc ttgcccggcg tcaatacggg ataataccgc gccacatagc
5821 agaactttaa aagtgctcat cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc
5881 ttaccgctgt tgagatccag ttcgatgtaa cccactcgtg cacccaactg atcttcagca
5941 tcttttactt tcaccagcgt ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa
6001 aagggaataa gggcgacacg gaaatgttga atactcatac tcttcctttt tcaatattat
6061 tgaagcattt atcagggtta ttgtctcatg agcggataca tatttgaatg tatttagaaa
6121 aataaacaaa taggggttcc gcgcacattt ccccgaaaag tgccacctga cgt
//
Caution:
1. This product is FOR RESEARCH USE ONLY!
2. The item is lyophilized form, Please take the powder plasmid by centrifugation at 5000rpm/min for 1min. Add 20μl ddH2O in to the tube of plasmid.